Showing posts sorted by relevance for query shi. Sort by date Show all posts
Showing posts sorted by relevance for query shi. Sort by date Show all posts

Wednesday, March 28, 2018

Have 99.999% Missed The Real Revolutionary Possibilities of Crypto?


hackernoon |  Money is power.

Nobody knew this better than the kings of the ancient world. That’s why they gave themselves an absolute monopoly on minting moolah.

They turned shiny metal into coins, paid their soldiers and their soldiers bought things at local stores. 

The king then sent their soldiers to the merchants with a simple message:

“Pay your taxes in this coin or we’ll kill you.”

That’s almost the entire history of money in one paragraph. Coercion and control of the supply with violence, aka the “violence hack.” The one hack to rule them all.

When power passed from monarchs to nation-states, distributing power from one strongman to a small group of strongmen, the power to print money passed to the state. Anyone who tried to create their own money got crushed.

The reason is simple:

Centralized enemies are easy to destroy with a “decapitation attack.” Cut off the head of the snake and that’s the end of anyone who would dare challenge the power of the state and its divine right to create coins.

Kings and nation states know the real golden rule: Control the money and you control the world.

And so it’s gone for thousands and thousands of years. The very first emperor of China, Qin Shi Huang (260–210 BC), abolished all other forms of local currency and introduced a uniform copper coin. That’s been the blueprint ever since. Eradicate alternative coins, create one coin to rule them all and use brutality and blood to keep that power at all costs.

In the end, every system is vulnerable to violence.

Well, almost every one.


Friday, August 20, 2021

Can You Even Imagine The Press Kwestioning Biden Like This?!?!?!

thesaker |   The first Taliban press conference after this weekend’s Saigon moment geopolitical earthquake, conducted by spokesman Zabihullah Mujahid, was in itself a game-changer.

The contrast could not be starker with those rambling pressers at the Taliban embassy in Islamabad after 9/11 and before the start of the American bombing – proving this is an entirely new political animal.

Yet some things never change. English translations remain atrocious.

Here is a good summary of the key Taliban statements, and

here (in Russian) is a very detailed roundup.

These are the key takeaways.

– No problem for women to get education all the way to college, and to continue to work. They just need to wear the hijab (like in Qatar or Iran). No need to wear a burqa. The Taliban insists, “all women’s rights will be guaranteed within the limits of Islamic law.”

– The Islamic Emirate “does not threaten anyone” and will not treat anyone as enemies. Crucially, revenge – an essential plank of the Pashtunwali code – will be abandoned, and that’s unprecedented. There will be a general amnesty – including people who worked for the former NATO-aligned system. Translators, for instance, won’t be harassed, and don’t need to leave the country.

– Security of foreign embassies and international organizations “is a priority.” Taliban special security forces will protect both those leaving Afghanistan and those who remain.

– A strong inclusive Islamic government will be formed. “Inclusive” is code for the participation of women and Shi’ites.

– Foreign media will continue to work undisturbed. The Taliban government will allow public criticism and debate. But “freedom of speech in Afghanistan must be in line with Islamic values.”

– The Islamic Emirate of Taliban wants recognition from the “international community” – code for NATO. The overwhelming majority of Eurasia and the Global South will recognize it anyway. It’s essential to note, for example, the closer integration of the expanding SCO – Iran is about to become a full member, Afghanistan is an observer – with ASEAN: the absolute majority of Asia will not shun the Taliban.

For the record, they also stated that the Taliban took all of Afghanistan in only 11 days: that’s pretty accurate. They stressed “very good relations with Pakistan, Russia and China.” Yet the Taliban don’t have formal allies and are not part of any military-political bloc. They definitely “won’t allow Afghanistan to become a safe haven for international terrorists”. That’s code for ISIS/Daesh.

On the key issue of opium/heroin: the Taliban will ban their production. So, for all practical purposes, the CIA heroin rat line is dead.

As eyebrow raising as these statements may be, the Taliban did not even get into detail on economic/infrastructure development deals – as they will need a lot of new industries, new jobs and improved Eurasian-wide trade relations. That will be announced later.

The go-to Russian guy

Sharp US observers are remarking, half in jest, that the Taliban in only one sitting answered more real questions from US media than POTUS since January.

What this first press conference reveals is how the Taliban are fast absorbing essential P.R. and media lessons from Moscow and Beijing, emphasizing ethnic harmony, the role of women, the role of diplomacy, and deftly defusing in a single move all the hysteria raging across NATOstan.

The next bombshell step in the P.R. wars will be to cut off the lethal, evidence-free Taliban-9/11 connection; afterwards the “terrorist organization” label will disappear, and the Taliban as a political movement will be fully legitimized.

Moscow and Beijing are meticulously stage-managing the Taliban reinsertion in regional and global geopolitics. This means that ultimately the SCO is stage-managing the whole process, applying a consensus reached after a series of ministerial and leaders meetings, leading to a very important summit next month in Dushanbe.

Tuesday, May 11, 2021

Sen. Rand Paul Goes In On Lil'Fauci's Gain Of Function Culpability

NYMag  |  Take, for instance, this paper from 1995: “High Recombination and Mutation Rates in Mouse Hepatitis Viruses Suggest That Coronaviruses May Be Potentially Important Emerging Viruses.” It was written by Dr. Ralph Baric and his bench scientist, Boyd Yount, at the University of North Carolina. Baric, a gravelly voiced former swim champion, described in this early paper how his lab was able to train a coronavirus, MHV, which causes hepatitis in mice, to jump species, so that it could reliably infect BHK (baby-hamster kidney) cell cultures. They did it using serial passaging: repeatedly dosing a mixed solution of mouse cells and hamster cells with mouse-hepatitis virus, while each time decreasing the number of mouse cells and upping the concentration of hamster cells. At first, predictably, the mouse-hepatitis virus couldn’t do much with the hamster cells, which were left almost free of infection, floating in their world of fetal-calf serum. But by the end of the experiment, after dozens of passages through cell cultures, the virus had mutated: It had mastered the trick of parasitizing an unfamiliar rodent. A scourge of mice was transformed into a scourge of hamsters. And there was more: “It is clear that MHV can rapidly alter its species specificity and infect rats and primates,” Baric said. “The resulting virus variants are associated with demyelinating diseases in these alternative species.” (A demyelinating disease is a disease that damages nerve sheaths.) With steady prodding from laboratory science, along with some rhetorical exaggeration, a lowly mouse ailment was morphed into an emergent threat that might potentially cause nerve damage in primates. That is, nerve damage in us.

A few years later, in a further round of “interspecies transfer” experimentation, Baric’s scientists introduced their mouse coronavirus into flasks that held a suspension of African-green-monkey cells, human cells, and pig-testicle cells. Then, in 2002, they announced something even more impressive: They’d found a way to create a full-length infectious clone of the entire mouse-hepatitis genome. Their “infectious construct” replicated itself just like the real thing, they wrote.

Not only that, but they’d figured out how to perform their assembly seamlessly, without any signs of human handiwork. Nobody would know if the virus had been fabricated in a laboratory or grown in nature. Baric called this the “no-see’m method,” and he asserted that it had “broad and largely unappreciated molecular biology applications.” The method was named, he wrote, after a “very small biting insect that is occasionally found on North Carolina beaches.”

In 2006, Baric, Yount, and two other scientists were granted a patent for their invisible method of fabricating a full-length infectious clone using the seamless, no-see’m method. But this time, it wasn’t a clone of the mouse-hepatitis virus — it was a clone of the entire deadly human SARS virus, the one that had emerged from Chinese bats, via civets, in 2002. The Baric Lab came to be known by some scientists as “the Wild Wild West.” In 2007, Baric said that we had entered “the golden age of coronavirus genetics.”

“I would be afraid to look in their freezers,” one virologist told me.

Baric and Shi Zhengli of the Wuhan Institute of Virology, the two top experts on the genetic interplay between bat and human coronaviruses, began collaborating in 2015.

Sunday, September 01, 2013

strategic plan - definitely! narrative plan - not so much...,


guardian | Massacres of civilians are being exploited for narrow geopolitical competition to control Mideast oil, gas pipelines. Few recall that US agitation against Syria began long before recent atrocities, in the context of wider operations targeting Iranian influence across the Middle East.

In May 2007, a presidential finding revealed that Bush had authorised CIA operations against Iran. Anti-Syria operations were also in full swing around this time as part of this covert programme, according to Seymour Hersh in the New Yorker. A range of US government and intelligence sources told him that the Bush administration had "cooperated with Saudi Arabia's government, which is Sunni, in clandestine operations" intended to weaken the Shi'ite Hezbollah in Lebanon. "The US has also taken part in clandestine operations aimed at Iran and its ally Syria," wrote Hersh, "a byproduct" of which is "the bolstering of Sunni extremist groups" hostile to the United States and "sympathetic to al-Qaeda." He noted that "the Saudi government, with Washington's approval, would provide funds and logistical aid to weaken the government of President Bashir Assad, of Syria," with a view to pressure him to be "more conciliatory and open to negotiations" with Israel. One faction receiving covert US "political and financial support" through the Saudis was the exiled Syrian Muslim Brotherhood.

According to former French foreign minister Roland Dumas, Britain had planned covert action in Syria as early as 2009: "I was in England two years before the violence in Syria on other business", he told French television:
"I met with top British officials, who confessed to me that they were preparing something in Syria. This was in Britain not in America. Britain was preparing gunmen to invade Syria."
The 2011 uprisings, it would seem - triggered by a confluence of domestic energy shortages and climate-induced droughts which led to massive food price hikes - came at an opportune moment that was quickly exploited. Leaked emails from the private intelligence firm Stratfor including notes from a meeting with Pentagon officials confirmed US-UK training of Syrian opposition forces since 2011 aimed at eliciting "collapse" of Assad's regime "from within."

So what was this unfolding strategy to undermine Syria and Iran all about? According to retired NATO Secretary General Wesley Clark, a memo from the Office of the US Secretary of Defense just a few weeks after 9/11 revealed plans to "attack and destroy the governments in 7 countries in five years", starting with Iraq and moving on to "Syria, Lebanon, Libya, Somalia, Sudan and Iran." In a subsequent interview, Clark argues that this strategy is fundamentally about control of the region's vast oil and gas resources.

Much of the strategy currently at play was candidly described in a 2008 US Army-funded RAND report, Unfolding the Future of the Long War (pdf). The report noted that "the economies of the industrialized states will continue to rely heavily on oil, thus making it a strategically important resource." As most oil will be produced in the Middle East, the US has "motive for maintaining stability in and good relations with Middle Eastern states":

Wednesday, February 17, 2016

kneegrows for Granny Goodness ignore her proven dangerousness at their own and the world's peril...,


ICH |  In the Milwaukee debate, Hillary Clinton took pride in her role in a recent UN Security Council resolution on a Syrian ceasefire:
But I would add this. You know, the Security Council finally got around to adopting a resolution. At the core of that resolution is an agreement I negotiated in June of 2012 in Geneva, which set forth a cease-fire and moving toward a political resolution, trying to bring the parties at stake in Syria together.
This is the kind of compulsive misrepresentation that makes Clinton unfit to be President. Clinton's role in Syria has been to help instigate and prolong the Syrian bloodbath, not to bring it to a close.

In 2012, Clinton was the obstacle, not the solution, to a ceasefire being negotiated by UN Special Envoy Kofi Annan. It was US intransigence - Clinton's intransigence - that led to the failure of Annan's peace efforts in the spring of 2012, a point well known among diplomats. Despite Clinton's insinuation in the Milwaukee debate, there was (of course) no 2012 ceasefire, only escalating carnage. Clinton bears heavy responsibility for that carnage, which has by now displaced more than 10 million Syrians and left more than 250,000 dead.

As every knowledgeable observer understands, the Syrian War is not mostly about Bashar al-Assad, or even about Syria itself. It is mostly a proxy war, about Iran. And the bloodbath is doubly tragic and misguided for that reason.

Saudi Arabia and Turkey, the leading Sunni powers in the Middle East, view Iran, the leading Shia power, as a regional rival for power and influence. Right-wing Israelis view Iran as an implacable foe that controls Hezbollah, a Shi'a militant group operating in Lebanon, a border state of Israel. Thus, Saudi Arabia, Turkey, and Israel have all clamored to remove Iran's influence in Syria.

This idea is incredibly naïve. Iran has been around as a regional power for a long time--in fact, for about 2,700 years. And Shia Islam is not going away. There is no way, and no reason, to "defeat" Iran. The regional powers need to forge a geopolitical equilibrium that recognizes the mutual and balancing roles of the Gulf Arabs, Turkey, and Iran. And Israeli right-wingers are naïve, and deeply ignorant of history, to regard Iran as their implacable foe, especially when that mistaken view pushes Israel to side with Sunni jihadists.

Yet Clinton did not pursue that route. Instead she joined Saudi Arabia, Turkey, and right-wing Israelis to try to isolate, even defeat, Iran. In 2010, she supported secret negotiations between Israel and Syria to attempt to wrest Syria from Iran's influence. Those talks failed. Then the CIA and Clinton pressed successfully for Plan B: to overthrow Assad.

When the unrest of the Arab Spring broke out in early 2011, the CIA and the anti-Iran front of Israel, Saudi Arabia, and Turkey saw an opportunity to topple Assad quickly and thereby to gain a geopolitical victory. Clinton became the leading proponent of the CIA-led effort at Syrian regime change.

Wednesday, January 18, 2017

If It Does Away With Physical Cash - How Will the Deep State Move Weight?


NYTimes |  CIA ties to international drug trafficking date to the Korean War. In 1949, two of Chiang Kai-shek's defeated generals, Li Wen Huan and Tuan Shi Wen, marched their Third and Fifth Route armies, with families and livestock, across the mountains to northern Burma. Once installed, the peasant soldiers began cultivating the crop they knew best, the opium poppy. 

When China entered the Korean War, the CIA had a desperate need for intelligence on that nation. The agency turned to the warlord generals, who agreed to slip some soldiers back into China. In return, the agency offered arms. Officially, the arms were intended to equip the warlords for a return to China. In fact, the Chinese wanted them to repel any attack by the Burmese. 

Soon intelligence began to flow to Washington from the area, which became known as the Golden Triangle. So, too, did heroin, en route to Southeast Asia and often to the United States. 

If the agency never condoned the traffic, it never tried to stop it, either. The CIA did, however, lobby the Eisenhower administration to prevent the Bureau of Narcotics and Dangerous Drugs, the DEA's predecessor, from establishing monitoring posts in the area to study the traffic. Today, the Golden Triangle accounts for about half the heroin in circulation in the world. 

During the Vietnam War, operations in Laos were largely a CIA responsibility. The agency's surrogate there was a Laotian general, Vang Pao, who commanded Military Region 2 in northern Laos. He enlisted 30,000 Hmong tribesmen in the service of the CIA. 

These tribesmen continued to grow, as they had for generations, the opium poppy. Before long, someone - there were unproven allegations that it was a Mafia family from Florida - had established a heroin refining lab in Region Two. The lab's production was soon being ferried out on the planes of the CIA's front airline, Air America. A pair of BNDD agents tried to seize an Air America. 

A pair of BNDD agents tried to seize an Air America DC-3 loaded with heroin packed into boxes of Tide soap powder. At the CIA's behest, they were ordered to release the plane and drop the inquiry.
The CIA was made officially aware of Manuel Antonio Noriega's involvement in the drug traffic in 1972, when Mr. Noriega was chief of intelligence of the Panama National Guard, and a promising CIA asset. The BNDD found evidence that Mr. Noriega was taking payoffs for allowing heroin to flow from Spain, through Panama City airport, and on to the United States. That information was part of a lengthy file on Mr. Noriega compiled by Jack Ingersoll, then chief of the BNDD.

Mr. Ingersoll was aware of Mr. Noriega's ties to the CIA, as was President Richard Nixon. When Mr. Nixon ordered Mr. Ingersoll to Panama to warn the country's military dictator, General Omar Torrijos, about the activities of Mr. Noriega and General Torrijos's brother Moises, Mr. Ingersoll hoped that law enforcement was finally "beginning to get the upper hand in its ongoing struggle with the CIA." He was wrong. The Watergate break-in occurred shortly after his visit. Mr. Nixon needed CIA support; his enthusiasm for the drug war evaporated. Mr. Ingersoll's successors at the newly formed DEA - Peter Bensinger, Francis Mullen and John Lawn - all told me they never saw his file, although they had asked to see everything the DEA had on Mr. Noriega. The material has disappeared. 

Shortly after General Torrijos's death in a mysterious airplane crash, Mr. Noriega, with CIA assistance, took command of the Panama National Guard. 

No one in the Reagan administration was prepared to do anything about the Noriega drug connection. As Norman Bailley, a National Security Council staff member at the time, told me, "The CIA and the Pentagon were resolutely opposed to acting on that knowledge, because they were a hell of a lot more worried about trying to keep Panama on our side with reference to Nicaragua than they were about drugs." Nowhere, however, was the CIA more closely tied to drug traffic than it was in Pakistan during the Afghan War. As its principal conduit for arms and money to the Afghan guerrillas, the agency chose the Pakistan military's Inter-Services Intelligence Bureau. The ISI in turn steered the CIA's support toward Gulbuddin Hekmatyar, an Islamic fundamentalist. Mr. Hekmatyar received almost half of the agency's financial support during the war, and his fighters were valiant and effective. But many of his commanders were also major heroin traffickers. 

As it had in Laos, the heroin traffic blossomed in the shadows of a CIA-sustained guerrilla war. Soon the trucks that delivered arms to the guerrillas in Afghanistan were coming back down the Khyber Pass full of heroin. 

The conflict and its aftermath have given the world another Golden Triangle: the Golden Crescent, sweeping through Afghanistan, Pakistan and parts of the former Soviet Union. Many of those involved in the drug traffic are men who were once armed, trained and financed by the CIA. 

Tuesday, June 08, 2021

Believe The Science: SARS-CoV2 Was Lab Synthesized

WSJ  |  A genome is a blueprint for the factory of a cell to make proteins. The language is made up of three-letter “words,” 64 in total, that represent the 20 different amino acids. For example, there are six different words for the amino acid arginine, the one that is often used in supercharging viruses. Every cell has a different preference for which word it likes to use most.

In the case of the gain-of-function supercharge, other sequences could have been spliced into this same site. Instead of a CGG-CGG (known as “double CGG”) that tells the protein factory to make two arginine amino acids in a row, you’ll obtain equal lethality by splicing any one of 35 of the other two-word combinations for double arginine. If the insertion takes place naturally, say through recombination, then one of those 35 other sequences is far more likely to appear; CGG is rarely used in the class of coronaviruses that can recombine with CoV-2.

In fact, in the entire class of coronaviruses that includes CoV-2, the CGG-CGG combination has never been found naturally. That means the common method of viruses picking up new skills, called recombination, cannot operate here. A virus simply cannot pick up a sequence from another virus if that sequence isn’t present in any other virus.

Although the double CGG is suppressed naturally, the opposite is true in laboratory work. The insertion sequence of choice is the double CGG. That’s because it is readily available and convenient, and scientists have a great deal of experience inserting it. An additional advantage of the double CGG sequence compared with the other 35 possible choices: It creates a useful beacon that permits the scientists to track the insertion in the laboratory.

Now the damning fact. It was this exact sequence that appears in CoV-2. Proponents of zoonotic origin must explain why the novel coronavirus, when it mutated or recombined, happened to pick its least favorite combination, the double CGG. Why did it replicate the choice the lab’s gain-of-function researchers would have made?

Yes, it could have happened randomly, through mutations. But do you believe that? At the minimum, this fact—that the coronavirus, with all its random possibilities, took the rare and unnatural combination used by human researchers—implies that the leading theory for the origin of the coronavirus must be laboratory escape.

When the lab’s Shi Zhengli and colleagues published a paper in February 2020 with the virus’s partial genome, they omitted any mention of the special sequence that supercharges the virus or the rare double CGG section. Yet the fingerprint is easily identified in the data that accompanied the paper. Was it omitted in the hope that nobody would notice this evidence of the gain-of-function origin?

Sunday, March 01, 2020

We Built a Chimeric Virus Encoding a Novel, Zoonotic CoV Spike Protein


I'm not a virologist and don't pretend to be. But I can read a fugging manual with the best of them, and understand what I've read. That said, slowly reread the nature paper from 2015 yourself. 

Therefore, to examine the emergence potential (that is, the potential to infect humans) of circulating bat CoVs, we built a chimeric virus encoding a novel, zoonotic CoV spike protein—from the RsSHC014-CoV sequence that was isolated from Chinese horseshoe bats1—in the context of the SARS-CoV mouse-adapted backbone. The hybrid virus allowed us to evaluate the ability of the novel spike protein to cause disease independently of other necessary adaptive mutations in its natural backbone. Using this approach, we characterized CoV infection mediated by the SHC014 spike protein in primary human airway cells and in vivo, and tested the efficacy of available immune therapeutics against SHC014-CoV. Together, the strategy translates metagenomics data to help predict and prepare for future emergent viruses.

Shi Zhengli - you know you done f'd up...., 

Mebbe what I'm watching from other "gain of function" virologists is a poster-child instance of the Weinstein's Distributed Information Suppression Complex?

The Proximal Origin of SARS-C0V2

virological |   Since the first reports of a novel pneumonia (COVID-19) in Wuhan city, Hubei province, China there has been considerable discussion and uncertainty over the origin of the causative virus, SARS-CoV-2. Infections with SARS-CoV-2 are now widespread in China, with cases in every province. As of 14 February 2020, 64,473 such cases have been confirmed, with 1,384 deaths attributed to the virus. These official case numbers are likely an underestimate because of limited reporting of mild and asymptomatic cases, and the virus is clearly capable of efficient human-to-human transmission. Based on the possibility of spread to countries with weaker healthcare systems, the World Health Organization has declared the COVID-19 outbreak a Public Health Emergency of International Concern (PHEIC). There are currently neither vaccines nor specific treatments for this disease.

SARS-CoV-2 is the seventh member of the Coronaviridae known to infect humans. Three of these viruses, SARS CoV-1, MERS, and SARS-CoV-2, can cause severe disease; four, HKU1, NL63, OC43 and 229E, are associated with mild respiratory symptoms. Herein, we review what can be deduced about the origin and early evolution of SARS-CoV-2 from the comparative analysis of available genome sequence data. In particular, we offer a perspective on the notable features in the SARS-CoV-2 genome and discuss scenarios by which these features could have arisen. Importantly, this analysis provides evidence that SARS-CoV-2 is not a laboratory construct nor a purposefully manipulated virus.

Say What?

The genomic comparison of both alpha- and betacoronaviruses (family Coronaviridae ) described below identifies two notable features of the SARS-CoV-2 genome: (i) based on structural modelling and early biochemical experiments, SARS-CoV-2 appears to be optimized for binding to the human ACE2 receptor; (ii) the highly variable spike (S) protein of SARS-CoV-2 has a polybasic (furin) cleavage site at the S1 and S2 boundary via the insertion of twelve nucleotides. Additionally, this event led to the acquisition of three predicted O-linked glycans around the polybasic cleavage site.

Thursday, July 23, 2020

Zheng-Li Shi..., Gurrl We Coming For Your Dome-Piece


counterpunch |  Our proposal is consistent with all the principal undisputed facts concerning SARS-CoV-2 and its origin. The MMP proposal has the additional benefit of reconciling many observations concerning SARS-CoV-2 that have proven difficult to reconcile with any natural zoonotic hypothesis.

For instance, using different approaches, numerous researchers have concluded that the SARS-CoV-2 spike protein has a very high affinity for the human ACE2 receptor (Walls et al., 2020; Piplani et al., 2020; Shang and Ye et al., 2020; Wrapp et al., 2020). Such exceptional affinities, ten to twenty times as great as that of the original SARS virus, do not arise at random, making it very hard to explain in any other way than for the virus to have been strongly selected in the presence of a human ACE2 receptor (Piplani et al., 2020).

In addition to this, a recent report found that the spike of RaTG13 binds the human ACE2 receptor (Shang and Ye et al., 2020). We proposed above that the virus in the mine directly infected humans lung cells. The main determinant of cell infection and species specificity of coronaviruses is initial receptor binding (Perlman and Netland, 2009). Thus RaTG13, unlike most bat coronaviruses, probably can enter and infect human cells, providing biological plausibility to the idea that the miners became infected with a coronavirus resembling RaTG13.

Moreover, the receptor binding domain (RBD) of SARS-CoV-2, which is the region of the spike that physically contacts the human ACE2 receptor, has recently been crystallised to reveal its spatial structure (Shang and Ye et al., 2020). These authors found close structural similarities between the spikes of SARS-CoV-2 and RaTG13 in how they bound the human ACE2 receptor:

“Second, as with SARS-CoV-2, bat RaTG13 RBM [a region of the RBD] contains a similar four-residue motif in the ACE2 binding ridge, supporting the notion that SARS-CoV-2 may have evolved from RaTG13 or a RaTG13-related bat coronavirus (Extended Data Table 3 and Extended Data Fig. 7). Third, the L486F, Y493Q and D501N residue changes from RaTG13 to SARS CoV-2 enhance ACE2 recognition and may have facilitated the bat-to-human transmission of SARS-CoV-2 (Extended Data Table 3 and Extended Data Fig. 7). A lysine-to-asparagine mutation at the 479 position in the SARS-CoV-2 RBD (corresponding to the 493 position in the SARS-CoV-2 RBD) enabled SARS-CoV to infect humans. Fourth, Leu455 contributes favourably to ACE2 recognition, and it is conserved between RaTG13 and SARS CoV-2; its presence in the SARS CoV-2 RBM may be important for the bat-to-human transmission of SARS-CoV-2″ (Shang and Ye et al., 2020). (italics added)

The significance of this molecular similarity is very great. Coronaviruses have evolved a diverse set of molecular solutions to solve the problem of binding ACE2 (Perlman and Netland, 2009; Forni et al., 2017). The fact that RaTG13 and SARS CoV-2 share the same solution makes RaTG13 a highly likely direct ancestor of Sars-CoV-2.

A further widely noted feature of SARS-CoV-2 is its furin site (Coutard et al., 2020). This site is absent from RaTG13 and other closely related coronaviruses. The most closely related virus with such a site is the highly lethal MERS (which broke out in 2012). Possession of a furin site enables SARS-CoV-2 (like MERS) to infect lungs and many other body tissues (such as the gastrointestinal tract and neurons), explaining much of its lethality (Hoffman et al., 2020; Lamers et al., 2020). However, no convincing explanation for how SARS-CoV-2 acquired this site has yet been offered. Our suggestion is that it arose due to the high selection pressure which existed in the miner’s lungs and which in general worked to ensure that the virus became highly adapted to the lungs. This explanation, which encompasses how SARS-CoV-2 came to target lung tissues in general, is an important aspect of our proposal.

The implication is therefore that the furin site was not acquired by recombination with another coronavirus and simply represents convergent evolution (as suggested by Andersen et al., 2020).
An intriguing alternative possibility is that SARS-CoV-2 acquired its furin site directly from the miner’s lungs. Humans possess an epithelial sodium channel protein called ENaC-a whose furin cleavage site is identical over eight amino acids to SARS-CoV-2 (Anand et al., 2020). ENaC-a protein is present in the same airway epithelial and lung tissues infected by SARS-CoV-2. It is known from plants that positive-stranded RNA viruses recombine readily with host mRNAs (Greene and Allison, 1994; Greene and Allison, 1996; Lommel and Xiong, 1991; Borja et al., 2007). The same evidence base is not available for positive-stranded animal RNA viruses, (though see Gorbalenya, 1992) but if plant viruses are a guide then acquisition of its furin site via recombination with the mRNA which encodes ENaC-a by SARS-CoV-2 is a strong possibility.

A further feature of SARS-CoV-2 has been the very limited adaptive evolution of its genome since the pandemic began (Zhan et al., 2020; van Dorp et al., 2020; Starr et al., 2020). It is a well-established principle that viruses that jump species undergo accelerated evolutionary change in their new host (e.g. Baric et al., 1997). Thus, SARS and MERS (both coronaviruses) underwent rapid and readily detectable adaptation to their new human hosts (Forni et al., 2017; Dudas and Rambaut, 2016). Such an adaptation period has not been observed for SARS-CoV-2 even though it has now infected many more individuals than SARS or MERS did. This has even led to suggestions that the SARS-CoV-2 virus had a period of cryptic circulation in humans infections that predated the pandemic (Chaw et al., 2020). The sole mutation consistently observed to accumulate across multiple studies is a D614G substitution in the spike protein (e.g. Korber et al., 2020). The numerically largest analysis of SARS-CoV-2 genomes, however, found no evidence at all for adaptive evolution, even for D614G (van Dorp et al., 2020).

The general observation is therefore that Sars-CoV-2 has remained functionally unchanged or virtually so (except for inconsequential genetic changes) since the pandemic began. This is a very important observation. It implies that SARS-CoV-2 is highly adapted across its whole set of component proteins and not just at the spike (Zhan et al., 2020). That is to say, its evolutionary leap to humans was completed before the 2019 pandemic began.

It is hard to imagine an explanation for this high adaptiveness other than some kind of passaging in a human body (Zhan et al., 2020). Not even passaging in human cells could have achieved such an outcome.

Two examples illustrate this point. In a follow up to Shang and Ye et al., (2020), a similar group of Minnesota researchers identified a distinct strategy by which the spike (S) protein (which contains the receptor bind domain; RBD) of SARS-CoV-2 evades the human immune system (Shang and Wan et al., 2020). This strategy involves more effective hiding of its RBD, but it implies again that the spike and the RBD evolved in tandem and in the presence of the human immune system (i.e. in a human body and not in tissue culture).

The Andersen authors, in their critique of a possible engineered origin for SARS-CoV-2, also stress the need for passaging in whole humans:

“Finally, the generation of the predicted O-linked glycans is also unlikely to have occurred during cell-culture passage, as such features suggest the involvement of an immune system” (Andersen et al., 2020).

The final point that we would like to make is that the principal zoonotic origin thesis is the one proposed by Andersen et al. Apart from being poorly supported this thesis is very complex. It requires two species jumps, at least two recombination events between quite distantly related coronaviruses and the physical transfer of a pangolin (having a coronavirus infection) from outside China (Andersen et al., 2020). Even then it provides no logical explanation of the adaptedness of SARS-CoV-2 across its whole genome or why the virus emerged in Wuhan.

By contrast, our MMP proposal requires only the one species jump, which is documented in the Master’s thesis. Although we do not rule out a possible role for mixed infections in the lungs of the miners, nor the possibility of recombination between closely related variants in those lungs, nor the potential acquisition of the furin site from a host mRNA, only mutation was needed to derive SARS-CoV-2 from RaTG13. Hence our attention earlier to the figure from P. Zhou et al., 2020showing that RaTG13 is the most closely related virus to SARS-CoV-2 over its entire length. This extended similarity is perfectly consistent with a mutational origin of SARS-CoV-2 from RaTG13.

In short, the MMP theory is a plausible and parsimonious explanation of all the key features of the COVID-19 pandemic and its origin. It accounts for the propensity of SARS-CoV-2 infections to target the lungs; the apparent preadapted nature of the virus; and its transmission from bats in Yunnan to humans in Wuhan.

Saturday, April 04, 2020

Shi Zhengli's Student Huang Yan Ling Mysteriously Disappeared


WaPo | The story of how the novel coronavirus emerged in Wuhan, China, has produced a nasty propaganda battle between the United States and China. The two sides have traded some of the sharpest charges made between two nations since the Soviet Union in 1985 falsely accused the CIA of manufacturing AIDS.

U.S. intelligence officials don’t think the pandemic was caused by deliberate wrongdoing. The outbreak that has now swept the world instead began with a simpler story, albeit one with tragic consequences: The prime suspect is “natural” transmission from bats to humans, perhaps through unsanitary markets. But scientists don’t rule out that an accident at a research laboratory in Wuhan might have spread a deadly bat virus that had been collected for scientific study.

“Good science, bad safety” is how Sen. Tom Cotton (R-Ark.) put this theory in a Feb. 16 tweet. He ranked such a breach (or natural transmission) as more likely than two extreme possibilities: an accidental leak of an “engineered bioweapon” or a “deliberate release.” Cotton’s earlier loose talk about bioweapons set off a furor, back when he first raised it in late January and called the outbreak “worse than Chernobyl.”

President Trump and Secretary of State Mike Pompeo added to the bile last month by describing the coronavirus as the “Chinese virus” and the “Wuhan virus,” respectively.

China dished wild, irresponsible allegations of its own. On March 12, Chinese foreign ministry spokesman Lijian Zhao charged in a tweet: “It might be [the] US army who brought the epidemic to Wuhan.” He retweeted an article that claimed, without evidence, that U.S. troops might have spread the virus when they attended the World Military Games in Wuhan in October 2019.

China retreated on March 22, when Ambassador to the United States Cui Tiankai told “Axios on HBO” that such rumors were “crazy” on both sides. A State Department spokesman said Cui’s comment was “welcome,” and Trump and Chinese President Xi Jinping pledged in a March 27 phone call to “focus on cooperative behavior,” a senior administration official told me.



Monday, October 16, 2023

Political Extremism In Israel And Ukraine

al-mayadeen  |  Operation Al-Aqsa Flood has caught "Israel" and the US by complete surprise. Americans are calling it ‘Israel’s Pearl Harbour’ moment --and an attack on America too). Nikki Haley (running for election) is succinct: To Netanyahu: “Finish them”.

Al-Aqsa Flood is held to be "Israel’s" greatest ‘intelligence failure’. Maybe so, but if Israeli and American intelligence did not see the attack coming, it is because of their Western mechanical, literal way of thinking. If I, and probably thousands of Al Mayadeen readers, broadly knew that this was in the works (but not of course, of its operational details), why was "Israel" blind to it?

The writing was clearly written on the wall. Two years ago, a missile campaign was unleashed from Gaza on "Tel Aviv" in response to the Temple Mount Movement’s religious zealotry and invasion of Al-Aqsa mosque. 

Palestinians rallied to the call to safeguard the Holy Mosque. It was not just Hamas; it was West Bank Palestinians and (for the first time, too, 1948 Palestinians who have Israeli passports) who all rose up to protect Al-Aqsa. Just to be clear, the rallying cry was not for Hamas; it was not for Palestinian nationalism. It was for Al-Aqsa -- an icon that goes to the heart of what it is to be Muslim (Sunni or Shi’a). It was a cry that resonated across the entire Islamic sphere.

Did the West not get it?  Apparently not. It was right under their nose, but super high-tech Intel doesn’t do symbolic meaning. That was true for the 2006 Lebanon war too, by the way; "Israel" could not grasp the symbolism of Hezballah’s ‘Karbala’ stand.

In the intervening period, "Israel" has shattered into two equally weighted factions holding to two irreconcilable visions of "Israel’s" future; two mutually opposing readings of history and of what it means to be Jewish.

The fissure could not be more complete. Except it is. One faction, which holds a majority in parliament, is broadly Mizrahi -- a former underclass in Israeli society; and the other, largely well-to-do liberal Ashkenazi. 

So, what has this to do with Al-Aqsa Flood? Well, the Right in Netanyahu’s government has two long-standing commitments. One is to rebuild the (Jewish) Temple on ‘Temple Mount’ (Haram al-Shariff).

Just to be clear, that would entail demolishing Al-Aqsa.

The second overriding commitment is to the founding of "Israel", on the "Land of Israel". And again, to be clear, this (in their view) would entail clearing Palestinians from the West Bank. Indeed, the settlers have been cleansing Palestinians from swaths of the West Bank over the past year (notably between Ramallah and Jehrico).

On Thursday morning (two days preceding Al-Aqsa Flood), more than 800 settlers stormed the Mosque Compound, under the full protection of Israeli forces. The drumbeat of such provocations is rising.

This is nothing new. The First Intifada was triggered by (then) PM Sharon making a provocative visit into the mosque. I was a part of Senator George Mitchell’s Presidential Committee investigating that incident. Even then, it was clear that Sharon intended the visit to fuel the fire of Religious nationalism. At that time, the Temple Mount Movement was a minnow; today it has ministers in Cabinet and in key security positions -- and has promised its followers to build the ‘Third Temple’.

So, the threat to Al-Aqsa has been building for two decades, and today is reaching an apex.  And yet US and Israeli intelligence didn’t see resistance coming, and nor did they see the settler violence building in the West Bank? 

What happened on Saturday was widely expected and clearly extensively planned. So what’s next?

Saturday, March 06, 2021

"We" Don't Know Bupkis Beyond Whatever You Tell "Us" - And You Ain't Told The Truth Yet!!!

bloomberg  |  More than a year after Covid-19 touched off the worst pandemic in more than a century, scientists have yet to determine its origins. The closest related viruses to SARS-CoV-2 were found in bats more than 1,000 miles from the central Chinese city of Wuhan, where the disease erupted in late 2019. Initially, cases were tied to a fresh food market and possibly the wildlife sold there. Other theories allege the virus accidentally escaped from a nearby research laboratory, or entered China via imported frozen food. Amid all the posturing and finger-pointing, governments and scientists agree that deciphering the creation story is key to reducing the risk of future pandemics.

1. Why don’t we know where it came from?

Where, when and how a pathogen crosses the species barrier and begins spreading in humans can be difficult, if not impossible, to pinpoint. Although SARS-CoV-2 is genetically similar to coronaviruses collected from a type of bat, it may have followed a long and convoluted path to Wuhan, a city of 11 million people. Scientists are tracing the earliest known cases to try to establish how they were infected, but the trail backward largely goes cold in early December 2019. Where a new disease starts spreading isn’t necessarily where it spilled over from the animal kingdom to infect the first human. HIV, for instance, is thought to have originated in chimpanzees in southeastern Cameroon, but didn’t begin spreading readily in people until the 1920s, when it reached the city of Kinshasa, hundreds of miles away. Scientists reported that finding in 2014, some three decades after the AIDS pandemic was recognized.

2. Who’s looking?

The World Health Organization was asked in May to help with the research, and a team of 17 international scientists, including one based in the U.S., concluded a four-week joint mission with 17 researchers from China in early February. Their findings are slated to be released in March. Other groups, including an expert panel convened by the medical journal The Lancet called the Covid-19 Commission, are also

3. What do we know so far?

Not much. Bats are the source of two coronaviruses that caused lethal outbreaks in people during the past two decades -- severe acute respiratory syndrome (SARS) and Middle Eastern respiratory syndrome (MERS) -- and the flying mammals are considered the reservoir host for SARS-CoV-2 as well as a plethora of other viruses. (A reservoir host is an animal that harbors a pathogen but isn’t sickened by it.) After SARS-CoV-2 emerged, Shi Zhengli, a virologist who heads a group that studies bat-borne coronaviruses at the Wuhan Institute of Virology, identified three closely related viruses collected during the previous 15 years. The closest, which is about 96% identical to SARS-CoV-2, was isolated from swabs and fecal material from Rhinolophus affinis, a species of horseshoe bat, in the southern Chinese province of Yunnan in 2013. Some researchers have linked that particular virus to a mineshaft in Mojiang county in Yunnan, where six men contracted a pneumonia-like disease in 2012 that killed three of them. Although SARS-CoV-2 and the virus from Yunnan may share a common ancestor, they’re not sufficiently similar to indicate SARS-CoV-2 was derived from the Yunnan virus. Sampling of bats in Hubei, the province of which Wuhan is the capital, haven’t found any positive for the pandemic strain. Coronaviruses sharing certain genetic features with SARS-CoV-2 have been found in other Rhinolophus bat species and pangolins, a scaly, ant-eating mammal, elsewhere in Asia, highlighting the broad distribution of related coronaviruses that may have contributed to SARS-CoV-2’s evolution. That’s led to multiple hypotheses for how and where it emerged.

probing the virus’s origins.

Thursday, March 17, 2011

world energy crunch as nuclear and oil both go wrong

Telegraph | The existential crisis for the world's nuclear industry could hardly have come at a worse moment. The epicentre of the world's oil supply is disturbingly close to its own systemic crisis as the Gulf erupts in conflict.

Libya's civil war has cut global crude supply by 1.1m barrels per day (bpd), eroding Opec's spare capacity to a wafer-thin margin of 2m bpd, if Goldman Sachs is correct.

Now events in the Gulf have turned dangerous after Saudi Arabia sent troops into Bahrain to help the Sunni monarchy crush largely Shi'ite dissent, risking a showdown with Iran.

Russia's finance minister Alexei Kudrin warned on Wednesday that the confluence of events in Japan and the Mid-East could push oil to $200 a barrel in a "short-lived" spike, which would snuff out global recovery.

While there has been no loss of oil output in the Gulf so far, the violent crackdown in Manama on Wednesday left four people dead and risks inflaming the volatile geopolitics of the region. The rout of protesters encamped at the Pearl roundabout had echoes of China's Tiananmen massacre.

The risk group Exclusive Analysis said such heavy-handed methods may provoke Iran to launch a proxy war by arming insurgents. This could rapidly cross the border, fuelling Shia irredentism in Saudi Arabia's Eastern Province. Any threat to Saudi control over the 5m bpd Ghawar oil field nearby would be a global "game-changer". "Much worse headlines can easily be imagined," said Raza Agha from RBS.

Thursday, June 12, 2014

christian iraqis have no place to go...,


HuffPo |  Sunni insurgents from an al Qaeda splinter group extended their control from the northern city of Mosul on Wednesday to an area further south that includes Iraq's biggest oil refinery in a devastating show of strength against the Shi'ite-led government.

Security sources said militants from the Islamic State in Iraq and the Levant (ISIL) - Sunni militants waging sectarian war on both sides of the Iraqi-Syrian frontier - drove into the town of Baiji late on Tuesday in armed vehicles, torching the court house and police station after freeing prisoners.

The militants offered safe passage to some 250 men guarding the refinery on the outskirts of Baiji, about 200 kilometers south of Mosul, on condition they leave.

Iraq's Foreign Minister Hoshyar Zebari called on his country's leaders to come together to face "the serious, mortal" threat. "The response has to be soon. There has to be a quick response to what has happened," he said during a trip to Greece.

Zebari said Baghdad would work with forces from the nearby Kurdish autonomous region to drive the fighters from Mosul.

Baiji resident Jasim al-Qaisi said the militants had also asked senior tribal chiefs in Baiji to persuade local police and soldiers not to resist their takeover.

"Yesterday at sunset some gunmen contacted the most prominent tribal sheikhs in Baiji via cellphone and told them: 'We are coming to die or control Baiji, so we advise you to ask your sons in the police and army to lay down their weapons and withdraw before (Tuesday) evening prayer'."

The Baiji refinery can process 300,000 barrels per day and supplies oil products to most of Iraq's provinces and is a major provider of power to Baghdad. A worker there said the morning shift had not been allowed to take over and the night shift was still on duty.

The push into Baiji began hours after ISIL overran Mosul, one of the great Sunni historic cities, advancing their aim of creating a Sunni Caliphate straddling the border between Iraq and Syria.

Tuesday, May 12, 2009

music and genetic code

Concerning to interesting theme on music, I would like to pay attention on physiological aspects of music and their connection with genetic code.

From the information viewpoint, living organisms are information essences. They live due to receiving of the genetic information from the ancestors, and they exist to transfer the genetic information to their descendants. In the biological literature it is possible quite often now to meet the statement that living organisms are the texts since a molecular level of their organization. Just from the information-hereditary viewpoint, all living organisms are unified wonderfully: all of them have identical bases of system of genetic coding (from many other possible viewpoints - for example, locomotion, metabolisms, etc -, living organisms have no such unification, they are differ one from another in many cases).

All heritable physiological aspects of living organisms are co-ordinated with basic structures of genetic code (heritable physiological subsystems of organism can’t be transmitted to next biological generations without such agreement with basic mechanisms of genetic coding).

It’s well known, that special musical forms have essential physiological possibilities to stimulate processes of biological growth, to have therapy effects, etc. So, it can be supposed, that these musical forms are connected (co-ordinated) with genetic coding system structurally. And interesting question is the following: on the base of using of our modern scientific knowledge of structures of genetic code, can we create musical forms which will be else more effective in physiological aspects to use them in the field of mass media, medicine, ergonomics, sport, etc?

My own investigations in this direction are connected with new results on genetic code structures. These results are described at the FIS site http://fis.iguw.tuwien.ac.at/recources/papers.html in my article “Genetic
Code and the Ancient Chinese “Book of Changes”” . An existence of binary sub-alphabets of genetic code was shown and a biperiodic octet table of 64 genetic triplets was constructed by me there. This genetic biperiodic table was coincided practically with a historical famous table of 64 hexagrams of the Ancient Chinese “Book of Changes””, written several thousands years ago (according to Ancient Chinese statements, the system of this Book is the main archetype of all nature; this system is a base for many branches of Orient medicine, culture, philosophy, etc.). If “physiological music” has a connection with genetic code, the question on its connection with this ancient conception of archetypes is urgent. According to Ancient Chinese statements, “music is that that represents a harmony of sky and earth, a co-ordination of Yin and Yang” (“Lui shi chun tsu”).

Some of these questions are considered in a special paragraph “Genetic code and music» in my book: S.V.Petoukhov “Biperiodic Table of Genetic Code and Number of Protons”, Moscow, 2001, 258 p. (in Russian; information on this book, on its content, etc. in English is at site http://members.tripod.com/vismath/sg/petoukhov.htm ).

I believe that binary sub-alphabets of genetic code and its biperiodic table permit to investigate a language of music more deeply and to create special forms of musical compositions characterized by the most physiological activity (so named “genetic music” or “genomusic”). Perhaps, due to its structural relationship with genetic code, this genetic music will be addressed to Jungian archetypes of people by the shortest route. (By the way, Carl Jung was connoisseur and profound expert of this “Book of Changes”, and the biperiodic table of genetic code has a connection with Jungian archetypes).

This theme of “genetic structured” music is a small addition to very interesting works by Juan Roederer è Michael Leyton, discussed on this session. In my opinion, physiological mechanisms and mathematical formalisms, analyzed by them for a theory of musical perception, should be coordinated (adjusted) with the specific structure of genetic code. The biological evolution can be interpreted in a whole as a process of deployment and duplicating of the certain forms of ordering (they can be named as “archetypes”). This thesis has a realization in physiological effective music also.

With best regards
Sergei Petoukhov

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